Hey Alex,
If you give me more specifics about what you're actually trying to do server-side, then I'll be able to give you a more specific answer (or a different answer altogether).
But, with the information you've give me, the best thing to do is to pass the product key along with any request to your servers. And on your servers use the LimeLM web API to verify that the key (a) exists (b) is not revoked and (c) is activated. And if all those conditions are true, then do something on your servers.
Like I said, if you give me more information then I'll be able to better help you.