Hey Radenko,
In case you haven't seen this, we cover your first and second questions in the step-by-step walkthrough.
1) How to organize version files on web server and locally ? How to put them in different folders on web server and that updates still works?
I'm assuming you're installing all your files & folders to a single folder, right? (E.g. C:\Program File\Radenko)
Just drag your files and folders to the "Your Program's Folder" in wyBuild. Thus when you include wyUpdate.exe and the client.wyc file with your app it will be installed in your program's base directory (E.g. C:\Program File\Radenko). When your user runs wyUpdate, it will know that the folder it's currently sitting in is your program's folder.
Does this make sense?
2) I have drag and drop new files in version 1.4 my application for installation i program files folder named Radenko.After running update nothing happens. My new files aren't copied in program files folder. Can you give us little bit information how to use that?
Tell me if the above answer and the step-by-step walkthrough help.
3) I have seen solution for proxy. I need to update local computers in intranet environment from local server.Can I do that with proxy ?
By default, wyUpdate reads the proxy settings from Internet Explorer. However if you want to specify a custom proxy, you can. Read Proxies in wyUpdate.
Tell me if this helps.