Using wyBuild for obfuscated code

I purchased a copy of wyBuild last year, and it's working fine. However, I am working on a software project that uses the .NET Reactor (http://www.eziriz.com/dotnet_reactor.htm) obfuscation tool for security purposes, as our code includes some proprietary algorithms

One side-effect of using an obfuscator, I'm discovering, is that when wyBuild creates a patch between different versions of the software, it essentially replicates the entire application, because the obfuscator makes the program code look completely new each time. Hence, I end up with LOTS of large patches for upgrading between each version. As you might imagine, with each new update, the number of patches grows larger and larger.

How would I go about skipping the entire patching process and just have each "update" result in downloading the latest complete copy of the application, instead of trying to patch the code?

I apologize in advance if the solution is posted somewhere else on the forum; I did some searching this morning and couldn't find anything that appeared to address this.